CDS
| Accession Number | TCMCG057C19036 |
| gbkey | CDS |
| Protein Id | XP_018480522.1 |
| Location | complement(join(28971177..28971326,28971401..28971520,28971603..28971771,28971869..28972826,28972925..28973243)) |
| Gene | LOC108851568 |
| GeneID | 108851568 |
| Organism | Raphanus sativus |
Protein
| Length | 571aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018625020.1 |
| Definition | PREDICTED: 20S-pre-rRNA D-site endonuclease nob1 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | O |
| Description | Nin one binding (NOB1) Zn-ribbon like (InterPro IPR014881), D-site 20S pre-rRNA nuclease (InterPro IPR017117) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] ko03051 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11883
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGATCCGAAACCAGTATCGATGTGGAGTTCCATAGTGAAGAAAGATCCCCCCTCAAAGCCTCCGACAACCGACGTAGCTCCGTCGGCGATTCTCGGTATGGTCGGAACCTGCAAATCCACAAAGGGGATATCTATGGCGGTTGTCGACGCCAACGCCGTCATCGACGGTAGCCATAGCCTAACCAGCTTCGCCGACAAATTCGTAACCGTCCCCGAAGTGATCTCGGAGATTCGCGACCCCGATTCTCGCCGTCGTCTCGAATTCATCCCTTTCACTATCGAAACCATGGAGCCTTCTCCTGAATCTCTCACTCAAGTTATTAAATTTGCTAAAGCTACTGGTGATTTGCAAACACTCTCTGATGTTGATCTTAAGTTGATTGCCTTGACGTACACGCTTGAGGCTGAGGTTCACGGGACTAAGAATCTTAGAGATGTTCCTCCGCCTATTCAAACTGTTAGGGTTAAGAGATTACCTGAGAAGGAGTTACCTGGCTGGGGATCCAATGTGGCTAACTTGGAGGAGTGGGAGGCACTTGAGGACGAGGCCGAGGAGAAATCGAACGCTATTTCCAAGATCCTTCCGCTTAAAGACCTTAACATGAACATACTTCCTTCGGACAGCTGTTCTGAGGTTGGTGATGTTGCGTCTCATACTGAGGGTCGAGAAGAGGATGAGGAGAGGAGAGAGAAGAGGTACCCGCCTAAGAAAACAGAGGTGAAGCTTGAGGGTAAGATGGTGGTGGAAGGAATAGATGCATCGCAGGGGGGAAATGATGATAAAGATGGTGGTGAATGGAGACCTGCGGTTAGTAGCAGTACTCACAGGAAGTTCCTTAGGAGAAAGGCCAAGTGGGAACATTACAATGCCTTGTCCGAGCAAGAGTTTCAGAAAGATCAAGAAGCTGACAAAGCTGGTGAAAAGTGTGGAAAAGGTAGCGGAAAGGATTATGGAGAGCTTTCGTCCATCTTAAAAGATATTAGGTTGGAGGAAGACTCATTAAAGGCTCTCCAAGAAGAAGCTGAAGAGGCGAATGGTGAGGATGATACTGAAGTCGAAGCTGAGGGGGTCGACATTGCTAGTGAGGATGGTGATACCTTTGAGGCATCATCGATGGCAGATGATGGTAGCAGCGAGCAGAGTTGGTCGTTGAGAGCCTTATCTGAGTCCAGTGTAGCTTGTATAACTGGTGACTACGCGATGCAAAATGTTATTATTCAAATGGGTTTGCGTTTGCTTGCACCGGGAGGTATGCAAATTCGCCAACTAAACAGGTGGGTGTTGAAATGCCATGCTTGCTACACAGTAACTCCTGAAATTGGAAGAATCTTCTGTCCCAAGTGCGGTAATGGCGGCACTCTGCGCAAAGTAGCGGTTACAATAGGCGAGAATGGCACCATCTTAGCTGCACGTAAGCCACGTGTAACACTTCGAGGGACTAAATTTTCGATACCGATGCCTAAAAGCGGAAGAGACGCAATCACCAAGAATCTGGTTCTTAGGGAAGATCAACTTCCTCAAAAGTACCTCCATCCCAAGACCAAGAAGAAAGCAAGCAAAGCGGGAGATGAGGATTTTATATCAGACGATGTGTTCATGAACCATCACAGTGATAAAAAGGCACCATTGCAGCCTCCAGTGAGAAAAGCTATGGCGGTTTTCAGTCAGAAACGAAACCCTAATGACAACCATTACTCGCGTTCTATGCACTGA |
| Protein: MDPKPVSMWSSIVKKDPPSKPPTTDVAPSAILGMVGTCKSTKGISMAVVDANAVIDGSHSLTSFADKFVTVPEVISEIRDPDSRRRLEFIPFTIETMEPSPESLTQVIKFAKATGDLQTLSDVDLKLIALTYTLEAEVHGTKNLRDVPPPIQTVRVKRLPEKELPGWGSNVANLEEWEALEDEAEEKSNAISKILPLKDLNMNILPSDSCSEVGDVASHTEGREEDEERREKRYPPKKTEVKLEGKMVVEGIDASQGGNDDKDGGEWRPAVSSSTHRKFLRRKAKWEHYNALSEQEFQKDQEADKAGEKCGKGSGKDYGELSSILKDIRLEEDSLKALQEEAEEANGEDDTEVEAEGVDIASEDGDTFEASSMADDGSSEQSWSLRALSESSVACITGDYAMQNVIIQMGLRLLAPGGMQIRQLNRWVLKCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGENGTILAARKPRVTLRGTKFSIPMPKSGRDAITKNLVLREDQLPQKYLHPKTKKKASKAGDEDFISDDVFMNHHSDKKAPLQPPVRKAMAVFSQKRNPNDNHYSRSMH |